Does a password policy with a restriction of repeated characters increase security? Not the answer you're looking for? With. checking for xmlParseFile in -lxml2 no -- Performing Test HAS_PIPE2 See the pkg-config man page for more details. configure: error: "libxml not found" You are missing a system requirement it seems. [ 11%] Building C object CMakeFiles/iio.dir/device.c.o link errors with --no-undefined-version. @steeldriver Thanks - that answers my original question. If total energies differ across different software, how do I decide which software to use? https://stackoverflow.com/questions/45775877/configure-error-please-reinstall-the-libzip-distribution. Also you should know that pgModeler 0.9.2 is packaged in Ubuntu 20.04 LTS at https://packages.ubuntu.com/focal/pgmodeler, so it installable as simple as. On what basis are pardoning decisions made by presidents or governors when exercising their pardoning power? from /home/patricaholden/williamson/testbuild/Pro3-Linux/packages/libiio/xml.c:23: Alternatively, you may set the environment variables LIBXML_CFLAGS and LIBXML_LIBS to avoid the need to call pkg-config. [ 19%] Building C object CMakeFiles/iio.dir/scan.c.o Connect and share knowledge within a single location that is structured and easy to search. OnDebian/Ubuntu you can install using apt-get as shown in the below command: Ran into similar issue when trying to install PHP SOAP extension. Here are my steps and the results. compilation terminated. Here is the full error message : configuring libxml-libxml-perl (2.0108+dfsg-1ubuntu0.1) . It is possible though that large asked CMake to find a package configuration file provided by "Python", but I had libxml2 installed but not libxml2-devel. Literature about the category of finitary monads. checking how to run the C preprocessor gcc -E I've installed libxml2-dev in my Ubuntu 20.04 terminal (under WSL), as it's a requirement for pgModeler. You can confirm this on your system by checking rpm -ql libxml2-devel | grep include | head -4 if also see the include files installed in /usr/include/libxml2/libxml. Looking for job perks? What's the cheapest way to buy out a sibling's share of our parents house if I have no cash and want to pay less than the appraised value? I'm trying to compile the lib https://github.com/bjz/gl-rs. installation of package XML had non-zero exit status, > sessionInfo() Yes, i think it is looking for libxml-2.0.pc in /usr/lib/pkgconfig/ direcotry, but it is not there. Don't subscribeAllReplies to my comments ERROR: configuration failed for package XML. i have noticed that libxml-2.0.pc is exist in other directory i.e. sequential (one-line) endnotes in plain tex/optex. * checking for gzopen in -lz. Find centralized, trusted content and collaborate around the technologies you use most. Easy way of installing it is using yum by issuing the following command on your CentOS/Fedora/RHEL Linux distributions. By clicking Sign up for GitHub, you agree to our terms of service and -- Check size of struct usb_functionfs_descs_head_v2 - done homebrew installs libxml2 as "keg only" which means it is not symlinked to the normal /usr/local/include and /usr/local/lib directories which means nothing can find it without help. from /usr/include/libxml2/libxml/threads.h:35, configure: error: xml2-config not found. pthread library not found; support for threads will be disabled. Sign up for a free GitHub account to open an issue and contact its maintainers and the community. Looking for job perks? -- Looking for newlocale Can you still use Commanders Strike if the only attack available to forego is an attack against an ally? Here is the diff in case someone else has the same problem, what didn't work, but I also tried: building and installing AUR version libxml2-git as well as installing libxml2-2.9.9-2. Make sure your system has the libxml-dev or libxml2-dev package installed. https://packages.ubuntu.com/focal/pgmodeler. Worked fine on my manjaro machine with just the base-devel group installed. The version nodes are kept so it Installing package(s) XML -- The C compiler identification is GNU 7.4.0 #include So you have to specify the location of libxml2 when you run ./configure, just as brew and libvisio tell you to: (The paths on your system may vary, so do check! Command line sequence for building libiio: thanks, which can be solved by installing, thanks, actually my issue was PKG_CONFIG_PATH wasn't setup correctly. sha256sum: b1a2fca3f7722d6c35a4f24974a1b5800e4d84ec5cb756bc61ef2b8c75a19e36. The XInclude engine has been reworked to properly support nested includes. privacy statement. It seems that R is picking up the libxml2 installation from Anaconda. libffi: Unfortunately, however, this appears not to be the case for libxml2 for some reason. How do you know the names. About 90 memory errors in code paths handling malloc failures have been fixed. configure: error: Package requirements ( libxml-2.0 ) were not met: No package 'libxml-2.0' found Consider adjusting the PKG_CONFIG_PATH environment variable if you installed software in a non-standard prefix. Thanks, I verified that /bin is indeed in my path. Have a question about this project? Content Discovery initiative April 13 update: Related questions using a Review our technical responses for the 2023 Developer Survey, Pipe to/from the clipboard in a Bash script. I have nearly no idea about cmake, so I probably didn't find out everything, but the file that gets created with the include path seems very wrong: These paths should be /usr/inlucde/libxml2. I've updated the README to explicitly mention this dependency. simplifying this part of the code base and improving error reporting. "Signpost" puzzle from Tatham's collection. How can I control PNP and NPN transistors together from one pin? [ 7%] Building C object CMakeFiles/iio.dir/channel.c.o checking whether gcc accepts -g yes -- Detecting C compiler ABI info As the error message indicates, you need to specify the libxml2 path using PKG_CONFIG_PATH. If this is the same problem for you as it was for me, we should report the problem upstream to the XML maintainers. no checking for xmlParseFile in -lxml2. I got the idea from the LibXML2 documentation. checking for gcc option to accept ISO C89 none needed During the ./configure it will produce the following error: ./configure: line 6233: AX_PROG_XSLTPROC: command not found configure: error: Cannot find xsltproc. If pkg-config cd build CMakeFiles/Makefile2:67: recipe for target 'CMakeFiles/iio.dir/all' failed One other thing, changing the PATH produces following error with CMake: CMake Warning at CMakeLists.txt:289 (message): mismatched. Futuristic/dystopian short story about a man living in a hive society trying to meet his dying mother. If you run: brew ls libxml2. Well occasionally send you account related emails. Why typically people don't use biases in attention mechanism? @Parfait launched from the shell directly or also from RStudio, same result. i am totally new about this so sorry if i am asking for such silly thing. [root@catest php-5.5.7]# yum install libxml2-devel Looking for job perks? should still be possible to run binaries linked against older versions. Why does contour plot not show point(s) where function has a discontinuity? Thanks for contributing an answer to Stack Overflow! Not the answer you're looking for? Connect and share knowledge within a single location that is structured and easy to search. I can build libiio using "make all", but then "make install" fails trying to write to /usr/lib even though I've specified my own sysroot in the cmake line. checking for gcc gcc Special thanks to Googles Open Source Security Subsidies program for Package libxml2.0 was not found in the pkg-config search path. 565), Improving the copy in the close modal and post notices - 2023 edition, New blog post from our CEO Prashanth: Community is the future of AI. 0.5 on a SuSE 7.0 distribution. Is it safe to publish research papers in cooperation with Russian academics? density matrix, Literature about the category of finitary monads. I've tried to run with & without "/bin" in the PATH and get the same results. To my unluck, i ran into following errors: The quick solution to the above problem is you need to install libxml2-devel package. To subscribe to this RSS feed, copy and paste this URL into your RSS reader. Could a subterranean river or aquifer generate enough continuous momentum to power a waterwheel for the purpose of producing electricity? so I'm trying to use pkg-config, as it suggests but then getting the new error: /app/INSTALL_FILES/pkg-config-.29.2 # ./configure --with-internal-glib but I get this error when I try 'make' command: # CC=gcc # export CC # make make You signed in with another tab or window. When a gnoll vampire assumes its hyena form, do its HP change? [ 23%] Building C object CMakeFiles/iio.dir/utilities.c.o -- Looking for strdup from /usr/include/libxml2/libxml/tree.h:1307, Please check your libxml2 installation. checking whether the C compiler works yes -- Looking for pthread_setname_np Learn more about Stack Overflow the company, and our products. -- Performing Test WITH_NETWORK_EVENTFD [ 34%] Building C object CMakeFiles/iio.dir/local.c.o does it work when you pass the location of the lib to the script? To learn more, see our tips on writing great answers. Hello- I found this discussion on the mailing list archives: >On Fri, 6 Oct 2000, Pallentin wrote: >> Hi there, >> I try to install ver. It's part of the Autoconf Archive; "apt-get install autoconf-archive" ought resolve this on Debian-based systems. # Install XML Make sure it is in your PATH or set the PKG_CONFIG environment variable to the full path to pkg-config. Why does Acts not mention the deaths of Peter and Paul? hi, when i configure dictconvert in dictconvert folder with ./configure command, then i get an error, it as follows: checking for libxml - version >= 2.5.0. no *** The xml2-config script installed by LIBXML could not be found *** If libxml was installed in PREFIX, make sure PREFIX/bin is in *** your path, or set the XML2_CONFIG environment variable to the *** full path to xml2-config. Get a virtual cloud desktop with the Linux distro that you want in less than five minutes with Shells! no checking for xmlParseFile in -lxml. By clicking Accept all cookies, you agree Stack Exchange can store cookies on your device and disclose information in accordance with our Cookie Policy. What to do? I'm a bit at a loss here, xsltproc is /usr/bin/xsltproc. Parabolic, suborbital and ballistic trajectories all follow elliptic paths. from /usr/include/libxml2/libxml/xmlmemory.h:218, Whether you are a digital nomad or just looking for flexibility, Shells can put your Linux machine on the device that you want to use. make[1]: *** [CMakeFiles/iio.dir/all] Error 2 For me, this gives: Answers to some questions suggest adding the path to PKG_CONFIG_PATH. add explicit note about dependency on autotools-archive, resolving Gi, https://nick-black.com/bugzilla/show_bug.cgi?id=543. To subscribe to this RSS feed, copy and paste this URL into your RSS reader. Correct name of the libxml2 configuration file for pkg-config is libxml-2.0.pc, you have already installed it from libxml2-dev package. You signed in with another tab or window. Share Improve this answer Follow answered Mar 14, 2019 at 16:39 stdunbar 15.8k 10 35 50 cmake --sysroot=${PWD}/../../ubuntu-18.04.2-minimal-armhf-2019-02-16 ../ Thanks for contributing an answer to Stack Overflow! rev2023.4.21.43403. from /usr/include/libxml2/libxml/globals.h:18, I'm using autoconf 2.69. Protection against entity expansion attacks, also known as billion laughs Connect and share knowledge within a single location that is structured and easy to search. cd libiio Checking directory of LIBXML_INCDIR What is this brick with a round back and a stud on the side used for? Why does contour plot not show point(s) where function has a discontinuity? Problems install R XML package on CentOS 7, Traffic: 580 users visited in the last hour, https://cran.rstudio.com/src/contrib/XML_3.98-1.9.tar.gz', https://cloud.r-project.org/src/contrib/XML_3.98-1.9.tar.gz, User Agreement and Privacy Have you tried doing the same command after rebooting your pc ? BLAS: /home/kkarius/anaconda3/lib/R/lib/libRblas.so Checking Irreducibility to a Polynomial with Non-constant Degree over Integer. The problem is it's looking for libxml-2.0, not libxml2. Can the game be left in an invalid state if all state-based actions are replaced? @ N0rbert - that's really useful information and is helping me progress, thanks. -- Found FLEX: /usr/bin/flex (found version "2.6.4") I made sure xml2 and libxml2 are installed (via sudo apt-get install) but that's not enough. By clicking Post Your Answer, you agree to our terms of service, privacy policy and cookie policy. I agree, this works for me. Asking for help, clarification, or responding to other answers. mkdir build -- Generating done Policy. The pgModeler instruction includes "To check if the library is correctly installed" run this command: pkg-config libxml2.0 --cflags --libs I'm hitting other issues now, will post a separate question if I can't work round these. Site design / logo 2023 Stack Exchange Inc; user contributions licensed under CC BY-SA. * checking for gzopen in -lz no [ 27%] Building C object CMakeFiles/iio.dir/network.c.o Start here for a quick overview of the site, Detailed answers to any questions you might have, Discuss the workings and policies of this site. Asking for help, clarification, or responding to other answers. documents which make heavy use of entities are rejected now. Using libxml2. [ 25%] Building C object CMakeFiles/iio.dir/local.c.o Browse other questions tagged. I'm going to close this - as I think the cross problem is in a new thread. -- Looking for libusb-1.0 : Found What differentiates living as mere roommates from living in a marriage-like relationship? Thanks for contributing an answer to Ask Ubuntu! from /usr/include/libxml2/libxml/globals.h:18, To learn more, see our tips on writing great answers. -- Looking for strdup - found The best answers are voted up and rise to the top, Not the answer you're looking for? It only mentions what their values should be, that is why I was curious how you knew that they should be called "LIBXML_CFLAGS" and "LIBXML_LIBS". checking for sed /bin/sed You signed in with another tab or window. make and false positives should be reduced. What's the cheapest way to buy out a sibling's share of our parents house if I have no cash and want to pay less than the appraised value? CMake Warning at bindings/python/CMakeLists.txt:4 (find_package): checking whether we are using the GNU C compiler yes sponsoring much of the work on this release! -- Looking for sys/types.h Upgrade Node.js to the latest version on Mac OS, Incompatible library version: nokogiri.bundle requires version 8.0.0 or later, but libiconv.2.dylib provides version 7.0.0, "code ." Connect and share knowledge within a single location that is structured and easy to search. -- Looking for stdint.h - found It only takes a minute to sign up. -- Looking for stdint.h So how can i add libxml-2.0.pc in /usr/lib/pkgconfig/. Your post saved me, thank you! How a top-ranked engineering school reimagined CS curriculum (Ep. What are the advantages of running a power tool on 240 V vs 120 V? How to combine several legends in one frame? but setting the config in the R environment doesn't help: UPDATE I already had libxml2 installed in the system see: Make sure your system has the libxml-dev or libxml2-dev package installed. Generally to troubleshoot a configure problem, you should download the package tarball, run the installation, and inspect the config.log file. error: linking with `cc` failed: exit code: 1 (a long list of linker args follows) note: /usr/bin/ld: cannot find -lxml2 If I'm reading this right, the linker cannot find the lib xml2. As you can see, libxml2 is being found in /usr/lib and not in the sysroot defined. I wasn't see anyway to override this false positive libxml1 check, so a hack of a workaround you can use is to patch out that branch of the configure script. no configure: error: "libxml not found" ERROR: configuration failed for package 'XML' Yet there seems to be a problem with libxml2. This release finally fixes symbol visibility on UNIX systems. [ 26%] Building C object CMakeFiles/iio.dir/scan.c.o https://github.com/analogdevicesinc/libiio.git, https://github.com/analogdevicesinc/libiio/blob/master/README.md. Browse other questions tagged, Where developers & technologists share private knowledge with coworkers, Reach developers & technologists worldwide. rev2023.4.21.43403. It only takes a minute to sign up. Ah, so you're using Anaconda's R distribution. I am also running into the failure when trying to cross-compile libraries. If you have specified LIBXML_INCDIR, make certain to also checking for xml2-config /home/kkarius/anaconda3/bin/xml2-config checking how to run the C preprocessor gcc -E I have added all dependancy described there listed bellow: After adding dependancies i am trying to run bellow commands. You have to ignore the suggestion from pgModeler documentation. Yes, the *-dev packages don't exist in Arch Linux, so I can't forget it. -- Check for working C compiler: /usr/bin/cc -- works With over 10 pre-installed distros to choose from, the worry-free installation life is here! Making statements based on opinion; back them up with references or personal experience. How a top-ranked engineering school reimagined CS curriculum (Ep. args = "--configure-args='--with-libxml2'") Ask Ubuntu is a question and answer site for Ubuntu users and developers. Platform: x86_64-pc-linux-gnu (64-bit) Using libxml2. Checking directory of LIBXML_INCDIR Located parser file /opt/lampp/include/parser.h Checking for 1.8: /opt/lampp/include Using libxml2. Could not find a package configuration file provided by "Python" with any What are the advantages of running a power tool on 240 V vs 120 V? checking for C compiler default output file name a.out -- Configuring done checking whether we are cross compiling no The output is this: > source("https://bioconductor.org/biocLite.R") By clicking Post Your Answer, you agree to our terms of service, privacy policy and cookie policy. CMakeFiles/iio.dir/build.make:302: recipe for target 'CMakeFiles/iio.dir/xml.c.o' failed The error message suggested configure: error: "libxml not found", but. [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C Thanks for trying omphalos! Thanks! -- Found LibXml2: /usr/lib/x86_64-linux-gnu/libxml2.so (found version "2.9.4") Excellent :-) Good luck with your project! It doesn't mention the names "LIBXML_CFLAGS" and "LIBXML_LIBS" as far as I can see. // . How to automatically extend windows virtual disk size [Openstack], No such file or directory c++ Error [CentOS], How to configure Open vSwitch bridge for OpenStack, Too many connections for neutron-db-manage [MySQL], How to manually install higher version of PIP for Python v2.7, [CentOS 7]: Yum install python-pip | No package python-pip available, [OpenStack noVNC]: Code 400, message Client must support binary or base64 protocol [Solved], [CentOS Stream 8]: Error: Unknown repo epel [Solved]. sudo apt-get install libxml2-dev I'm unable to determine which is the right version (libxml or libxml2) for 14.04 but you'll want to make sure you have the -dev version installed. /tmp/RtmpY66UhU/downloaded_packages I made sure xml2 and libxml2 are installed (via sudo apt-get install) but that's not enough. "Signpost" puzzle from Tatham's collection. Perhaps you should add the directory containing 'libxml2.0.pc' to the PKG_CONFIG_PATH environment variable No package 'libxml2.0' found Answers to some questions suggest adding the path to PKG_CONFIG_PATH. [ 30%] Building C object CMakeFiles/iio.dir/sort.c.o configure script cannot find libxml2 on mac. Embedded hyperlinks in a thesis or research paper. error: Don't move past current position; error: Limit number of parser errors; parser: Lower entity nesting limit with XML_PARSE_HUGE; parser: Don't increase depth twice when parsing internal entities; parser: Improve detection of entity loops; parser: Only report a single entity error; libxml.h: Remove dubious definition of LIBXML_STATIC https://download.gnome.org/sources/libxml2/2.11/libxml2-2.11.0.tar.xz (2.50M) cd build -- Build files have been written to: /home/patricaholden/williamson/testbuild/Pro3-Linux/packages/libiio/build, Just to point out - we already provide binaries for armhf (Raspbian Stretch & Raspbian Jessie), they are linked from the readme at: Tikz: Numbering vertices of regular a-sided Polygon, Embedded hyperlinks in a thesis or research paper. checking for suffix of executables It'd really be nice to figure out a better way to do this. How a top-ranked engineering school reimagined CS curriculum (Ep. Home Linux PHP configure error: xml2-config not found. I had the same error but libxml2-dev was already installed so that didn't help. -- Performing Test HAS_O_TMPFILE How about saving the world? On whose turn does the fright from a terror dive end? I'm unable to determine which is the right version (libxml or libxml2) for 14.04 but you'll want to make sure you have the -dev version installed. means no "/usr/lib/pkgconfig/libxml-2.0.pc", usually found in the libxml2 development files. To subscribe to this RSS feed, copy and paste this URL into your RSS reader. What is this brick with a round back and a stud on the side used for? Will check out your README and see if this fits in my project scope, which I think it should. Interpreting non-statistically significant results: Do we have "no evidence" or "insufficient evidence" to reject the null? checking for gzopen in -lz yes mkdir build CMakeFiles/iio.dir/build.make:302: recipe for target 'CMakeFiles/iio.dir/xml.c.o' failed which indicates to me that /usr/lib/x86_64-linux-gnu/pkgconfig is already in the default path for pkg-config. I have checked the pathname for sysroot and it is most certainly correct. from /usr/include/libxml2/libxml/tree.h:1307, configure: error: xml2-config not found. checking whether we are using the GNU C compiler yes headers, it was still possible to declare them manually. Making 'packages.html' done I wasn't see anyway to override this false positive libxml1 check, so a hack of a workaround you can use is to patch out that branch of the configure script.
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